7LNX
I146A mutant of the isopentenyl phosphate kinase from Candidatus methanomethylophilus alvus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 40.565, 73.277, 166.930 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.420 - 2.300 |
R-factor | 0.2565 |
Rwork | 0.251 |
R-free | 0.31070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.534 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.420 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.111 | 0.691 |
Rmeas | 0.130 | 0.877 |
Rpim | 0.070 | 0.531 |
Number of reflections | 22800 | 2038 |
<I/σ(I)> | 10.1 | 1.7 |
Completeness [%] | 99.0 | 92.1 |
Redundancy | 6.2 | 4.2 |
CC(1/2) | 0.998 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 295 | 0.1 M Bis-Tris pH 5.5 28% PEG 3350. 0.1 M Sodium Chloride |