7LNV
Apo Structure of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-25 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54178 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 194.392, 45.630, 113.874 |
Unit cell angles | 90.00, 121.20, 90.00 |
Refinement procedure
Resolution | 37.290 - 2.200 |
R-factor | 0.2303 |
Rwork | 0.228 |
R-free | 0.28140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lkk |
RMSD bond length | 0.003 |
RMSD bond angle | 0.520 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 44070 | 2159 |
<I/σ(I)> | 9.91 | |
Completeness [%] | 99.8 | |
Redundancy | 3.9 | |
CC(1/2) | 0.997 | 0.552 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 294 | 0.2 M Sodium Malonate pH 7.0, 20% PEG 3350. |