7LM7
Crystal structure of the Zn(II)-bound AdcAII E280Q mutant variant of Streptococcus pneumoniae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-16 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.954 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 47.346, 72.959, 81.463 |
Unit cell angles | 90.00, 95.57, 90.00 |
Refinement procedure
Resolution | 39.580 - 3.120 |
R-factor | 0.2203 |
Rwork | 0.218 |
R-free | 0.26030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3cx3 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.270 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.580 | 3.230 |
High resolution limit [Å] | 3.120 | 3.120 |
Rmerge | 0.043 | 0.190 |
Number of reflections | 4870 | 412 |
<I/σ(I)> | 11.8 | |
Completeness [%] | 98.0 | |
Redundancy | 4 | |
CC(1/2) | 0.996 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M imidazole pH 8.0, 0.2 M zinc acetate, 20% (w/v) polyethylene glycol (PEG) 3350 |