7LLD
Crystal structure of GenB4 in complex with external aldimine of PLP-sisomicin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X12 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X12 |
Temperature [K] | 291 |
Detector technology | PIXEL |
Collection date | 2018-06-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 71.455, 75.036, 186.031 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.730 - 1.400 |
R-factor | 0.1465 |
Rwork | 0.144 |
R-free | 0.18760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | several |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MrBUMP |
Refinement software | PHENIX (1.19.2-4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.510 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Number of reflections | 195485 | 19105 |
<I/σ(I)> | 12.85 | |
Completeness [%] | 99.5 | |
Redundancy | 2 | |
CC(1/2) | 0.990 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 0.15 M DL-malic acid and 20% PEG 3350 |