7LHK
High-Resolution Crystal Structure of a Lipin/Pah Phosphatidic Acid Phosphatase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97934 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 144.410, 171.626, 62.845 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.250 - 1.950 |
R-factor | 0.1672 |
Rwork | 0.165 |
R-free | 0.21150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6tzy |
RMSD bond length | 0.011 |
RMSD bond angle | 1.094 |
Data reduction software | DIALS |
Data scaling software | Aimless (0.6.2) |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.250 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.085 | 0.686 |
Rmeas | 0.088 | 0.686 |
Rpim | 0.024 | 0.238 |
Number of reflections | 720604 | 5410 |
<I/σ(I)> | 16.77 | 2.87 |
Completeness [%] | 99.5 | 95.83 |
Redundancy | 12.6 | 7.9 |
CC(1/2) | 0.999 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | Tt Pah2 in a ratio of 2:1 with well solution of 0.1M sodium cacodylate pH 6.5, 1 M NaCl, 10% glycerol, 30% PEG 600 |