7LFD
Fab 7D6 bound to ApoL1 BH3 like peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2018-09-20 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 129.947, 129.947, 90.817 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 70.674 - 2.157 |
R-factor | 0.1676 |
Rwork | 0.166 |
R-free | 0.20280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7lfb |
RMSD bond length | 0.006 |
RMSD bond angle | 0.958 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.674 | 2.273 |
High resolution limit [Å] | 2.157 | 2.163 |
Rmerge | 0.149 | 1.638 |
Rmeas | 0.167 | 1.855 |
Rpim | 0.074 | 0.855 |
Number of reflections | 40614 | 2033 |
<I/σ(I)> | 11.3 | 1.2 |
Completeness [%] | 89.6 | |
Redundancy | 9.4 | |
CC(1/2) | 0.998 | 0.371 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 1.8M Ammonium Citrate pH 7.0 |