Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7LA8

O6 variable lymphocyte receptor ectodomain bound to 3-HSO3-Gal-4GlcNAc

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2016-11-16
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97915
Spacegroup nameI 4
Unit cell lengths107.255, 107.255, 63.197
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.920 - 1.897
R-factor0.186476030987
Rwork0.184
R-free0.22906
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1rvx
RMSD bond length0.015
RMSD bond angle1.393
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.11_2567)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.2002.010
High resolution limit [Å]1.8961.900
Rpim0.0480.855
Number of reflections284964560
<I/σ(I)>13.31.2
Completeness [%]99.9
Redundancy6.8
CC(1/2)0.9980.559
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP9293.152.4 M (NH4)2SO4, 0.1 M Bicine pH 9.0, 20% glycerol

247536

PDB entries from 2026-01-14

PDB statisticsPDBj update infoContact PDBjnumon