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7L79

Crystal structure of broadly HIV-1-neutralizing antibody VRC40.01

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-02-26
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths62.792, 135.950, 136.908
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.916 - 2.826
R-factor0.223
Rwork0.220
R-free0.27950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3se8
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (V1.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.850
High resolution limit [Å]2.8007.5902.800
Rmerge0.2060.0870.796
Rmeas0.2410.1030.948
Rpim0.1240.0550.508
Total number of observations104728
Number of reflections2807215271338
<I/σ(I)>4.2
Completeness [%]98.597.398
Redundancy3.73.33.3
CC(1/2)0.9910.668
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.529310.6 % PEG 8000, 200 mM Zinc Acetate, Sodium Cacodylate, pH 6.5

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