7L77
Crystal structure of broadly HIV-1-neutralizing antibody VRC33.01
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-19 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.155, 70.839, 65.380 |
Unit cell angles | 90.00, 99.80, 90.00 |
Refinement procedure
Resolution | 29.214 - 1.543 |
R-factor | 0.1528 |
Rwork | 0.152 |
R-free | 0.18650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3se8 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.570 |
High resolution limit [Å] | 1.540 | 4.180 | 1.540 |
Rmerge | 0.079 | 0.044 | 0.520 |
Rmeas | 0.093 | 0.052 | 0.636 |
Rpim | 0.050 | 0.028 | 0.360 |
Total number of observations | 219175 | ||
Number of reflections | 62505 | 3224 | 2642 |
<I/σ(I)> | 9.9 | ||
Completeness [%] | 96.4 | 96.8 | 81.9 |
Redundancy | 3.5 | 3.5 | 2.8 |
CC(1/2) | 0.996 | 0.674 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 293 | 13% PEG3350, 10% Iso-propanol, Ammonium Citrate, pH 4.5 |