7L6P
Crystal structure of dihydropteroate synthase from Stenotrophomonas maltophilia with active site-bound imidazole
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-03-12 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.740, 68.810, 155.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.340 - 2.350 |
R-factor | 0.2014 |
Rwork | 0.198 |
R-free | 0.25270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5uur |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MR-Rosetta |
Refinement software | PHENIX (1.19rc4-4035) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.340 | 41.340 | 2.410 |
High resolution limit [Å] | 2.350 | 10.510 | 2.350 |
Rmerge | 0.049 | 0.020 | 0.563 |
Rmeas | 0.055 | 0.022 | 0.644 |
Total number of observations | 147717 | ||
Number of reflections | 28734 | 365 | 2085 |
<I/σ(I)> | 18.23 | 44.02 | 2.17 |
Completeness [%] | 99.9 | 95.5 | 100 |
Redundancy | 5.141 | 4.312 | 4.089 |
CC(1/2) | 0.999 | 0.999 | 0.900 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | StmaA.01019.a.B1.PW38739 at 16.2 mg/ml was mixed 1:1 with 0.1 M Tris/Bicine pH 8.5, 0.1 M amino acids, 10% (w/v) PEG4000, and 20% (v/v) glycerol (Morpheus H11). Stored at 14C. Cryo: direct. Tray 314007h11: puck cbg9-2. |