7L5A
Crystal structure of the photosensory module from Xanthomonas campestris bacteriophytochrome XccBphP in the Pfr state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | I 41 |
Unit cell lengths | 164.378, 164.378, 40.437 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.980 - 2.950 |
R-factor | 0.189 |
Rwork | 0.185 |
R-free | 0.26000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5akp |
RMSD bond length | 0.010 |
RMSD bond angle | 1.170 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.980 | 3.130 |
High resolution limit [Å] | 2.950 | 2.950 |
Rmerge | 0.122 | 0.738 |
Rmeas | 0.136 | 0.818 |
Rpim | 0.058 | 0.348 |
Number of reflections | 11755 | 1877 |
<I/σ(I)> | 8.8 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 5.4 | 5.5 |
CC(1/2) | 0.994 | 0.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.7 | 294 | 6% (w/v) polyethylene glycol (PEG) 4000, 0.1 M 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES), 10% (v/v) isopropanol |