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7L4S

Crystal structure of the OxyR regulatory domain of Shewanella oneidensis MR-1, reduced form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]173
Detector technologyPIXEL
Collection date2016-04-27
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.98
Spacegroup nameP 32
Unit cell lengths83.998, 83.998, 185.141
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution42.000 - 2.400
R-factor0.1931
Rwork0.174
R-free0.22230
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1i69
RMSD bond length0.005
RMSD bond angle0.890
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.440
High resolution limit [Å]2.4002.400
Rmerge0.1040.509
Number of reflections571632815
<I/σ(I)>7.7
Completeness [%]99.9100
Redundancy4.13.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293.15Drops were made by combining 1 ul of SoOxyR C203S RD with 1 ul of mother liquor containing 4.0 M ammonium acetate and 0.1 M Bis-Tris propane pH 7.0. Rod-shaped crystals appeared within 3 to 4 days.

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