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7L2A

Molybdopterin cofactor biosynthesis protein E from Burkholderia multivorans ATCC 17616

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2020-07-30
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths47.730, 72.660, 105.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.760 - 1.850
R-factor0.191
Rwork0.189
R-free0.22320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2QIE as per MoRDa
RMSD bond length0.008
RMSD bond angle0.939
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX (1.19rc4)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.0420.0320.407
Rmeas0.0450.0350.465
Number of reflections321304222319
<I/σ(I)>23.1249.552.88
Completeness [%]99.998.899.5
Redundancy6.8215.784.241
CC(1/2)0.9990.9980.946
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5287Molecular Dimensions Morpheus screen, E3: 10% w/v PEG 4000, 20% v/v glycerol, 0.03 M of each diethyleneglycol, triethyleneglycol, tetraethyleneglycol, pentaethyleneglycol, 0.1 M MES/imidazole pH 6.5: BumuA.00098.a.B1.PS37859 at 41.7mg/ml + 0.5% beta-octyl-glucoside: cryo: direct: tray 317330e3, puck xxu3-3.

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PDB entries from 2024-08-07

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