7L0D
SARS-CoV-2 Main Protease (Mpro) in Complex with ML188
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-11-14 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54178 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.190, 52.666, 46.098 |
Unit cell angles | 90.00, 102.83, 90.00 |
Refinement procedure
Resolution | 30.160 - 2.390 |
R-factor | 0.2042 |
Rwork | 0.201 |
R-free | 0.26100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6m03 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.584 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 (v703x) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.160 | 2.476 |
High resolution limit [Å] | 2.390 | 2.390 |
Rmerge | 0.069 | 0.313 |
Rpim | 0.045 | 0.210 |
Number of reflections | 9338 | 886 |
<I/σ(I)> | 12.33 | 3.39 |
Completeness [%] | 87.9 | 84.62 |
Redundancy | 3 | |
CC(1/2) | 0.995 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 23% (w/v) PEG 3350, Potassium Sodium Tartrate Tetrahydrate |