7L0A
Crystal structure of s-formylglutathione hydrolase (FrmB) from Staphylococcus aureus, apoenzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-28 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 128.303, 80.500, 66.651 |
Unit cell angles | 90.00, 113.84, 90.00 |
Refinement procedure
Resolution | 36.810 - 1.600 |
R-factor | 0.158 |
Rwork | 0.157 |
R-free | 0.17700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4rgy |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.075 | 0.415 |
Rmeas | 0.093 | 0.059 |
Rpim | 0.054 | 0.034 |
Total number of observations | 217757 | |
Number of reflections | 78193 | 3961 |
<I/σ(I)> | 11.7 | |
Completeness [%] | 96.4 | 99.1 |
Redundancy | 2.8 | 2.8 |
CC(1/2) | 0.992 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.7 | 289 | 20 uL hanging drops containing a 1:1 mixture of protein (6 mg/mL) and crystallization buffer (0.1 M Tricine pH 7.7, 15% PEG6K, 2.5 M NaCl, 0.125% n-dodecyl-B-D-glucoside) |