7KXA
Crystal structure of Enoyl-[acyl-carrier-protein] reductase [NADH] (InhA) from Mycobacterium kansasii in complex with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-11-12 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97856 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 97.670, 97.670, 141.030 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.870 - 1.800 |
R-factor | 0.1519 |
Rwork | 0.151 |
R-free | 0.16960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6udf apo structure |
RMSD bond length | 0.009 |
RMSD bond angle | 0.936 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19rc4-4035) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.850 |
High resolution limit [Å] | 1.800 | 8.050 | 1.800 |
Rmerge | 0.055 | 0.025 | 0.626 |
Rmeas | 0.057 | 0.026 | 0.690 |
Number of reflections | 37516 | 519 | 2716 |
<I/σ(I)> | 23.64 | 51.65 | 2.29 |
Completeness [%] | 99.9 | 97.7 | 99.3 |
Redundancy | 10.439 | 8.934 | 5.635 |
CC(1/2) | 0.999 | 0.999 | 0.866 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 287 | RigakuReagents JCSG+ screen C9: 25% (V/V) propanediol-1,2, 10% (V/V) glycerol, 100mM potassium phosphate monobasic / sodium phosphate dibasic pH 6.5: MykaA.00472.a.B1.PS38576 at 27.08mg/ml + 4.5mM NAD: tray 318760 c9: cryo: 20% EG: puck nso5-4. |