7KVR
SARS-CoV-2 Main protease immature form - FMAX Library E09 fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS SIRIUS BEAMLINE MANACA |
Synchrotron site | LNLS SIRIUS |
Beamline | MANACA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-03 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.35502 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.600, 101.474, 102.227 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.020 - 2.120 |
R-factor | 0.2012 |
Rwork | 0.200 |
R-free | 0.22450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7kfi |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.020 | 72.020 | 2.230 |
High resolution limit [Å] | 2.120 | 6.690 | 2.120 |
Rmerge | 0.101 | 0.040 | 0.883 |
Rmeas | 0.110 | 0.043 | 0.959 |
Rpim | 0.043 | 0.017 | 0.370 |
Total number of observations | 253894 | 9031 | 38622 |
Number of reflections | 39743 | 1444 | 5852 |
<I/σ(I)> | 12.2 | 34.2 | 2.3 |
Completeness [%] | 97.3 | 99.9 | 100 |
Redundancy | 6.4 | 6.3 | 6.6 |
CC(1/2) | 0.998 | 0.999 | 0.829 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1 M MES, pH 6.7, 5% DMSO, 8% PEG4000 |