7KRF
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with (E)-4-(3-(2-cyanovinyl)-5-fluorophenoxy)-3-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenyl sulfurofluoridate (JLJ710)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-12-14 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.979 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 226.002, 69.742, 105.414 |
| Unit cell angles | 90.00, 105.59, 90.00 |
Refinement procedure
| Resolution | 57.790 - 2.600 |
| R-factor | 0.2227 |
| Rwork | 0.221 |
| R-free | 0.26510 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5tw3 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 57.790 | 57.000 | 2.750 |
| High resolution limit [Å] | 2.600 | 7.770 | 2.600 |
| Rmerge | 0.062 | 0.034 | 1.747 |
| Rmeas | 0.067 | 0.037 | 1.897 |
| Number of reflections | 48679 | 1902 | 7608 |
| <I/σ(I)> | 15.88 | 43.62 | 1.08 |
| Completeness [%] | 98.9 | 98 | 96.4 |
| Redundancy | 6.68 | 6.02 | 6.565 |
| CC(1/2) | 0.999 | 0.998 | 0.582 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 50 mM imidazole pH 6.5, 18% PEG 8,000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine |






