7KRD
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 4-(3-chloro-5-cyanophenoxy)-3-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenyl sulfurofluoridate (JLJ702)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-2 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-08-17 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 224.403, 69.471, 104.764 |
| Unit cell angles | 90.00, 105.81, 90.00 |
Refinement procedure
| Resolution | 29.232 - 2.700 |
| R-factor | 0.2222 |
| Rwork | 0.220 |
| R-free | 0.26800 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5tw3 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 29.232 | 29.232 | 2.860 |
| High resolution limit [Å] | 2.700 | 7.840 | 2.700 |
| Rmerge | 0.074 | 0.021 | 1.754 |
| Rmeas | 0.080 | 0.022 | 1.892 |
| Total number of observations | 299064 | ||
| Number of reflections | 42983 | 1809 | 6870 |
| <I/σ(I)> | 17.06 | 73.53 | 1.03 |
| Completeness [%] | 99.8 | 97.5 | 99.7 |
| Redundancy | 6.958 | 6.777 | 7.16 |
| CC(1/2) | 0.999 | 1.000 | 0.652 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 50 mM imidazole pH 6.5, 18% PEG 8,000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine |






