7KR1
Crystal structure of SARS-CoV-2 NSP3 macrodomain (C2 crystal form, 310 K)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 310 |
Detector technology | PIXEL |
Collection date | 2020-06-19 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.03314 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 134.837, 30.447, 37.878 |
Unit cell angles | 90.00, 98.95, 90.00 |
Refinement procedure
Resolution | 66.600 - 1.550 |
R-factor | 0.1816 |
Rwork | 0.180 |
R-free | 0.22140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7kr0 |
Data reduction software | DIALS (2.1.4) |
Data scaling software | DIALS (2.1.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.600 | 1.605 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.193 | 3.870 |
Rpim | 0.045 | 0.880 |
Number of reflections | 22439 | 2242 |
<I/σ(I)> | 9.07 | 0.51 |
Completeness [%] | 100.0 | 99.96 |
Redundancy | 19.6 | 19.9 |
CC(1/2) | 0.999 | 0.399 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 100 mM Tris, pH 8.5, 100 mM sodium acetate, 28% PEG4000 |