7KQ9
The aminoacrylate form of the beta-Q114A mutant Tryptophan Synthase at 1.50 Angstrom resolution with cesium ion at the metal coordination site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-01-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 182.622, 59.920, 67.416 |
Unit cell angles | 90.00, 94.87, 90.00 |
Refinement procedure
Resolution | 39.280 - 1.500 |
R-factor | 0.1796 |
Rwork | 0.178 |
R-free | 0.21660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vfd |
RMSD bond length | 0.008 |
RMSD bond angle | 1.537 |
Data reduction software | xia2 |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 90.982 | 39.245 | 1.580 |
High resolution limit [Å] | 1.499 | 4.740 | 1.500 |
Rmerge | 0.069 | 0.051 | 0.478 |
Rmeas | 0.080 | 0.059 | 0.559 |
Rpim | 0.031 | 0.023 | 0.220 |
Total number of observations | 24506 | 103928 | |
Number of reflections | 114154 | 3713 | 16430 |
<I/σ(I)> | 10.1 | 26.4 | 2.3 |
Completeness [%] | 98.4 | 97.4 | 97.6 |
Redundancy | 6.6 | 6.6 | 6.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 298 | 50 mM Bicine-CsOH, 10% PEG 8,000, 4 mM Spermine, pH 7.6 |