7KLE
Ternary structure of Dpo4 bound to N7mG in the template base paired with incoming dCTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-03-15 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97648 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 99.650, 102.472, 53.034 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.563 - 3.003 |
R-factor | 0.232 |
Rwork | 0.229 |
R-free | 0.28760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qz7 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.569 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 10.000 | 3.050 |
High resolution limit [Å] | 3.000 | 7.980 | 3.000 |
Rmerge | 0.167 | 0.055 | 0.991 |
Total number of observations | 79435 | ||
Number of reflections | 11345 | 634 | 565 |
<I/σ(I)> | 4.5 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 7 | 6.5 | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 12 to 18% PEG 3350, 100 mM HEPES (pH 6.6), 100 mM calcicum acetate, and 2.5% glycerol |