7KL8
Structure of F420 binding protein Rv1558 from Mycobacterium tuberculosis with F420 bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.953719973564 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 169.544, 169.544, 169.544 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.990 - 2.469 |
R-factor | 0.20106 |
Rwork | 0.200 |
R-free | 0.22012 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3r5r |
RMSD bond length | 0.009 |
RMSD bond angle | 1.248 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.990 | 2.558 |
High resolution limit [Å] | 2.469 | 2.469 |
Rmerge | 0.187 | 5.963 |
Rpim | 0.028 | 0.945 |
Number of reflections | 30473 | 2899 |
<I/σ(I)> | 28.5 | 1.1 |
Completeness [%] | 99.7 | 97.54 |
Redundancy | 78.5 | |
CC(1/2) | 1.000 | 0.416 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 0.1 M Sodium citrate pH 5.8, 0.5 M Ammonium sulfate, 1 M Lithium sulfate, and 3 % Glycerol (v/v) |