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7KKV

Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (native, crystal form I)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2020-09-27
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.97911
Spacegroup nameH 3 2
Unit cell lengths98.947, 98.947, 197.852
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.875 - 2.000
R-factor0.1703
Rwork0.169
R-free0.18800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7k9d
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHENIX (1.16_3549)
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]42.84042.8402.000
High resolution limit [Å]1.9508.9301.950
Rmerge0.0290.0201.710
Rmeas0.0330.0231.922
Rpim0.0150.0120.867
Total number of observations12375212848739
Number of reflections272463151855
<I/σ(I)>20.565.71
Completeness [%]99.195.796.9
Redundancy4.54.14.7
CC(1/2)1.0000.9990.490
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP292100 mM HEPES (pH 7.0 to 7.5), 200 mM NH4Cl and 39 to 42.5% 2-Methyl-2,4-pentanediol (MPD)

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PDB entries from 2024-09-11

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