7KK7
crystal structure of ligand-free PLEKHA7 PH domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-04 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 1.1158 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.310, 59.060, 78.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.190 - 2.800 |
R-factor | 0.2171 |
Rwork | 0.213 |
R-free | 0.27610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7kjo |
RMSD bond length | 0.011 |
RMSD bond angle | 1.784 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.200 | 2.950 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.071 | 0.810 |
Number of reflections | 6980 | 1000 |
<I/σ(I)> | 16 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.8 | 7.1 |
CC(1/2) | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | Protein in 180 mM NaCl, 20 mM Tris pH 8, 50 mM BisTris pH 6.0, 0.7 mM TCEP was mixed with 20% PEG 3350, 0.02 mM MgCl2, 100 mM HEPES pH 7.0 |