7KJQ
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Picloram
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03318 |
Spacegroup name | F 2 2 2 |
Unit cell lengths | 55.096, 114.648, 115.257 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.640 - 1.350 |
R-factor | 0.1753 |
Rwork | 0.175 |
R-free | 0.18570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7kfo |
RMSD bond length | 0.006 |
RMSD bond angle | 0.813 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.610 | 1.398 |
High resolution limit [Å] | 1.350 | 1.350 |
Number of reflections | 39735 | 3894 |
<I/σ(I)> | 21.52 | |
Completeness [%] | 98.9 | |
Redundancy | 2 | |
CC(1/2) | 1.000 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Ammonium Sulfate, 0.1 M HEPES: NaOH, pH 7.5, 25 % (w/v) PEG 3350 |