7KJI
Plasmodium falciparum protein Pf12p bound to nanobody D9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.953649 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 61.991, 67.098, 110.945 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.753 - 3.250 |
R-factor | 0.2534 |
Rwork | 0.245 |
R-free | 0.28550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7kj7 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.578 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15_3459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.753 | 42.753 | 3.440 |
High resolution limit [Å] | 3.250 | 9.550 | 3.250 |
Rmerge | 0.153 | 0.048 | 2.018 |
Rmeas | 0.160 | 0.050 | 2.100 |
Total number of observations | 101019 | ||
Number of reflections | 7710 | 346 | 1207 |
<I/σ(I)> | 13.51 | 44.77 | 1.44 |
Completeness [%] | 99.8 | 99.1 | 99.3 |
Redundancy | 13.102 | 10.968 | 12.978 |
CC(1/2) | 0.999 | 0.999 | 0.741 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 281 | 0.1 M bis-tris chloride pH 6.5, 0.2 M magnesium chloride, 25% PEG3350 |