7K7P
Structure of SARS-CoV-2 nonstuctural protein 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 103 |
Detector technology | PIXEL |
Collection date | 2020-09-08 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.54 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 36.589, 36.589, 141.253 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.420 - 1.770 |
R-factor | 0.1914 |
Rwork | 0.188 |
R-free | 0.21650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hsx |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.420 | 1.800 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.071 | 0.634 |
Rmeas | 0.073 | 0.743 |
Rpim | 0.018 | 0.376 |
Number of reflections | 10106 | 965 |
<I/σ(I)> | 40.38 | |
Completeness [%] | 99.8 | |
Redundancy | 13.5 | |
CC(1/2) | 0.998 | 0.759 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 293 | 0.2 M Sodium acetate trihydrate, 0.1 M Sodium cacodylate trihydrate pH 6.5, 30 % w/v Polyethylene glycol 8,000 |