7K7J
EphB6 receptor ectodomain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-22 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.97920 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 105.310, 105.310, 188.724 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.055 - 3.004 |
R-factor | 0.2371 |
Rwork | 0.235 |
R-free | 0.28830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fl7 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.423 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | BALBES |
Refinement software | PHENIX ((1.16_3549: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Number of reflections | 21919 | 1066 |
<I/σ(I)> | 20.1 | |
Completeness [%] | 99.9 | |
Redundancy | 6.7 | |
CC(1/2) | 0.999 | 0.608 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1.5 M sodium nitrate, 0.1 M sodium acetate trihydrate pH 4.6 |