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7K6H

Crystal structure of the first bromodomain (BD1) of human BRD4 bound to XMD8-92

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-04-05
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths41.820, 52.030, 57.270
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.635 - 1.500
R-factor0.1662
Rwork0.165
R-free0.19030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7k6g
RMSD bond length0.006
RMSD bond angle0.871
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.12-2829_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.63528.6351.540
High resolution limit [Å]1.5006.7101.500
Rmerge0.1070.1090.096
Rmeas0.1160.1190.104
Total number of observations144304
Number of reflections206182731515
<I/σ(I)>18.617.7715.63
Completeness [%]99.998.6100
Redundancy6.9995.5387.059
CC(1/2)0.9910.9780.992
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2910.2 M Ammonium acetate, 0.1 M Sodium citrate tribasic dihydrate pH 5.6, 30% w/v Polyethylene glycol 4,000

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