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7K5L

Ebola virus VP40 octameric ring generated by an RNA oligonucleotide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-17
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97931
Spacegroup nameP 4 2 2
Unit cell lengths80.626, 80.626, 47.083
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.540 - 1.380
R-factor0.181
Rwork0.180
R-free0.19700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ldm
RMSD bond length0.005
RMSD bond angle0.784
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.18_3845)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]80.6301.410
High resolution limit [Å]1.3801.380
Rmerge0.0591.519
Number of reflections309771580
<I/σ(I)>27.82.4
Completeness [%]95.7100
Redundancy24.825.7
CC(1/2)0.9990.853
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.42931 uL 3.5 mg/mL protein, 1 uL 75 mM sodium citrate tribasic pH 8.4, 150 mM ammonium acetate

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