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7K47

Crystal Structure of Glucosamine-1-phosphate N-acetyltransferase from Stenotrophomonas maltophilia K279a

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2020-07-16
DetectorRAYONIX MX-300
Wavelength(s)0.97856
Spacegroup nameP 63
Unit cell lengths91.290, 91.290, 184.550
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.880 - 2.900
R-factor0.1774
Rwork0.174
R-free0.20540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)two domains of PDB entry 5vmk as per Morda
RMSD bond length0.004
RMSD bond angle0.610
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX (1.18.2)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.980
High resolution limit [Å]2.90012.9702.900
Rmerge0.0510.0370.543
Rmeas0.0540.0400.568
Number of reflections193332231433
<I/σ(I)>30.5752.94.83
Completeness [%]99.995.7100
Redundancy11.4828.9111.585
CC(1/2)1.0000.9990.947
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8287Optimization screen based on Rigaku Reagens JCSG+ condition B4: 100mM HEPES free acid / Sodium hydroxide pH 8.0, 8% (V/V) ethylene glycol, 9.6% (w/V) PEG 8000: StmaA.00150.a.B1.PW38698 at 24mg/ml: tray 319930h10: cryo: 20% EG in 2 steps: puck aod1-6

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