7K41
Bacterial O-GlcNAcase (OGA) with compound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.3 |
Synchrotron site | ALS |
Beamline | 5.0.3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-09-24 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.976 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 188.771, 52.646, 84.464 |
Unit cell angles | 90.00, 99.69, 90.00 |
Refinement procedure
Resolution | 41.630 - 2.000 |
Rwork | 0.186 |
R-free | 0.21830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2chn |
RMSD bond length | 0.007 |
RMSD bond angle | 1.356 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.630 | 2.064 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.053 | 0.447 |
Number of reflections | 52607 | 3250 |
<I/σ(I)> | 17.46 | 1.6 |
Completeness [%] | 93.4 | 58.42 |
Redundancy | 3.6 | |
CC(1/2) | 0.998 | 0.781 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.5 M NaAcetate, 15% PEG 3350, 0.1 M MES pH 6.0, 20% glycerol |