7K3M
Crystal Structure of the Beta Lactamase Class D from Chitinophaga pinensis by Serial Crystallography
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 295 |
Detector technology | PIXEL |
Collection date | 2019-11-12 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.413, 69.347, 70.035 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.280 - 1.800 |
R-factor | 0.1829 |
Rwork | 0.177 |
R-free | 0.22430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | The crystal structure of the same protein in the complex with avibactam which will be deposited |
RMSD bond length | 0.003 |
RMSD bond angle | 0.580 |
Data reduction software | DIALS |
Data scaling software | PRIME |
Phasing software | MOLREP (11.7.02) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.280 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.670 | 0.850 |
Number of reflections | 23276 | 1134 |
<I/σ(I)> | 2.81 | 0.76 |
Completeness [%] | 100.0 | 99.8 |
Redundancy | 79.11 | |
CC(1/2) | 0.970 | 0.730 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 295 | 0.1 M Bis-Tris propane pH 9.0, 8 %(w/v) PEG20000 |