7JZ1
Crystal structure of broadly Plasmodium RIFIN reactive LAIR1-inserted antibody MGC34
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 101.379, 101.379, 319.878 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.330 - 3.370 |
R-factor | 0.2391 |
Rwork | 0.238 |
R-free | 0.25480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3kgr |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.470 |
High resolution limit [Å] | 3.350 | 7.210 | 3.350 |
Rmerge | 0.177 | 0.097 | 0.784 |
Rmeas | 0.202 | 0.112 | 0.909 |
Rpim | 0.094 | 0.055 | 0.445 |
Total number of observations | 62324 | ||
Number of reflections | 14664 | 1646 | 1416 |
<I/σ(I)> | 3.7 | ||
Completeness [%] | 99.8 | 99.1 | 100 |
Redundancy | 4.3 | 3.9 | 3.7 |
CC(1/2) | 0.988 | 0.603 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M MgCl2 hexahydrate, 0.1 M Tris HCl pH 8.5, 20% PEG 3350, 25% PEG 400 |