7JW6
Crystal structure of Drosophila Nibbler EXO domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-08 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 44.338, 117.101, 87.481 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.300 - 1.500 |
R-factor | 0.2032 |
Rwork | 0.202 |
R-free | 0.23170 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | model from SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.754 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18_3855) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.300 | 1.554 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.168 | 1.262 |
Rmeas | 0.175 | 1.313 |
Rpim | 0.048 | 0.358 |
Number of reflections | 36858 | 3620 |
<I/σ(I)> | 15.06 | 2.2 |
Completeness [%] | 97.5 | 99.94 |
Redundancy | 13.1 | 13.1 |
CC(1/2) | 0.995 | 0.713 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 0.064 M sodium citrate 7.0, 0.1 M HEPES, pH 7.0, 10% PEG5000MME |