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7JVD

Fab of 5.6 monoclonal mouse IgG1 co-crystallized with the trisaccharide form of serotype 3 pneumococcal capsular polysaccharide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-15
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths49.516, 134.302, 133.119
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.100 - 2.300
R-factor0.1872
Rwork0.183
R-free0.22060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xjm
RMSD bond length0.009
RMSD bond angle1.155
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2702.380
High resolution limit [Å]2.3002.300
Number of reflections202271971
<I/σ(I)>14.62.5
Completeness [%]100.0100
Redundancy1313.7
CC(1/2)0.9990.836
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP92980.1 M Sodium chloride, 0.1 M BICINE pH 9.0, 20% v/v Polyethylene glycol monomethyl ether 550

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