7JUG

C-type carbohydrate-recognition domain 4 of the mannose receptor complexed with Man-alpha1-6Man

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SSRL BEAMLINE BL12-2
Synchrotron site	SSRL
Beamline	BL12-2
Temperature [K]	100
Detector technology	PIXEL
Collection date	2019-11-20
Detector	DECTRIS PILATUS 6M
Wavelength(s)	0.97946
Spacegroup name	P 1 21 1
Unit cell lengths	34.192, 54.249, 35.935
Unit cell angles	90.00, 95.01, 90.00

Refinement procedure

Resolution	35.800 - 1.400
R-factor	0.1384
Rwork	0.137
R-free	0.16750
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	partially refined model from a different complex
Data reduction software	XDS
Data scaling software	Aimless (0.7.4)
Phasing software	PHENIX
Refinement software	PHENIX (1.15.2_3472)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	35.800	35.800	1.420
High resolution limit [Å]	1.400	7.530	1.400
Rmerge	0.040	0.052	0.085
Rmeas	0.044	0.057	0.092
Rpim	0.016	0.022	0.035
Total number of observations		1259	8193
Number of reflections	25400	184	1271
<I/σ(I)>	28.1	42.7	13.6
Completeness [%]	98.2	99.7	95.7
Redundancy	6.8	6.8	6.4
CC(1/2)	0.999	0.991	0.995

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP		295	Protein solution: 6.0mg/ml protein in 5mM CaCl2, 10mM Tris, pH 8.0, 25mM NaCl, and 30mM Man-alpha1-6-Man; Reservoir solution: 5% Peg 8K, 0.1M Mes pH=6.0