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7JTL

Structure of SARS-CoV-2 ORF8 accessory protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]80
Detector technologyPIXEL
Collection date2020-05-29
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.000001
Spacegroup nameP 41 21 2
Unit cell lengths44.258, 44.258, 264.111
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.650 - 2.040
R-factor0.2214
Rwork0.217
R-free0.25740
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle0.991
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.6502.110
High resolution limit [Å]2.0402.040
Rmerge0.1011.592
Rmeas0.1061.694
Rpim0.0320.555
Number of reflections175101593
<I/σ(I)>14.921.2
Completeness [%]95.1
Redundancy10
CC(1/2)0.9990.390
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP298100 mM sodium dihydrogen phosphate pH 6.5, 12 % (w/v) PEG8000

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PDB entries from 2024-10-09

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