7JR3
SARS-CoV-2 3CL protease crystallized under reducing conditions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS SIRIUS BEAMLINE MANACA |
Synchrotron site | LNLS SIRIUS |
Beamline | MANACA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-03 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.3670 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 98.995, 80.990, 51.743 |
Unit cell angles | 90.00, 114.76, 90.00 |
Refinement procedure
Resolution | 43.403 - 1.550 |
R-factor | 0.1604 |
Rwork | 0.159 |
R-free | 0.18320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wnp |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.403 | 43.403 | 1.620 |
High resolution limit [Å] | 1.530 | 4.570 | 1.530 |
Rmerge | 0.038 | 0.017 | 0.733 |
Rmeas | 0.045 | 0.020 | 0.922 |
Total number of observations | 340506 | ||
Number of reflections | 105953 | 4126 | 14200 |
<I/σ(I)> | 15.53 | 62.29 | 1.22 |
Completeness [%] | 96.0 | 99.2 | 79.4 |
Redundancy | 3.214 | 3.663 | 2.354 |
CC(1/2) | 0.999 | 0.999 | 0.748 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 0.1 M MES, 15% PEG4000, 1 mM TCEP |