7JP4
Crystal structure of a refolded head domain hemagglutinin HA from Influenza A virus A/Fort Monmouth/1/1947
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-10-09 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.250, 59.950, 66.540 |
Unit cell angles | 90.00, 95.06, 90.00 |
Refinement procedure
Resolution | 33.140 - 2.000 |
R-factor | 0.1926 |
Rwork | 0.191 |
R-free | 0.22570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6n41 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.809 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2-3874-000) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.140 | 33.140 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.094 | 0.033 | 0.529 |
Rmeas | 0.108 | 0.039 | 0.609 |
Total number of observations | 113371 | ||
Number of reflections | 27217 | 318 | 2008 |
<I/σ(I)> | 11.56 | 28.57 | 3.09 |
Completeness [%] | 99.6 | 96.1 | 100 |
Redundancy | 4.165 | 3.66 | 4.178 |
CC(1/2) | 0.997 | 0.999 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 287 | InvbN.18715.a.TK11.PD38383 at 5.04 mg/mL against Morpheus screen condition H5 with 10% PEG 20000, 20% PEG 550 MME, 0.1 M MOPS/Hepes pH 7.5, 0.02 M glutamate, 0.02 M alanine, 0.02 M glycine, 0.02 M lysine, 0.02 M serine; crystal tracking ID 311819h5, unique puck ID awm9-4 |