7JN8
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RGNTLVIVSR
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-03-04 |
| Detector | DECTRIS PILATUS3 R 200K-A |
| Wavelength(s) | 1.5418 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 37.974, 95.477, 117.493 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.740 - 3.090 |
| R-factor | 0.1845 |
| Rwork | 0.178 |
| R-free | 0.31860 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1dkz |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.451 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.170 |
| High resolution limit [Å] | 3.090 | 8.460 | 3.120 |
| Rmerge | 0.151 | 0.084 | 0.372 |
| Rmeas | 0.187 | 0.106 | 0.485 |
| Rpim | 0.107 | 0.063 | 0.308 |
| Number of reflections | 3772 | 209 | 175 |
| <I/σ(I)> | 4.2 | ||
| Completeness [%] | 90.8 | 84.6 | 83.7 |
| Redundancy | 2.4 | 2.1 | 1.9 |
| CC(1/2) | 0.994 | 0.905 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 2.8 M (NH4)2SO4, 0.1 M K3PO4 |






