7JMR
Crystal structure of the pea pathogenicity protein 2 from Madurella mycetomatis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97934 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 98.853, 98.853, 62.380 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.740 - 1.670 |
R-factor | 0.1782 |
Rwork | 0.177 |
R-free | 0.19550 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.029 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHELX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.740 | 1.690 |
High resolution limit [Å] | 1.670 | 1.670 |
Rmerge | 0.070 | |
Number of reflections | 78547 | 2702 |
<I/σ(I)> | 40 | |
Completeness [%] | 99.5 | 96 |
Redundancy | 8.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 15 % PEG 3350, 0.2 M Calcium Chloride, 0.1 M MES |