7JJA
Crystal structure of the ZinT-like domain of Streptococcus pneumoniae AdcA in the apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-03 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.954 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 44.166, 50.169, 87.783 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.730 - 1.010 |
R-factor | 0.1295 |
Rwork | 0.129 |
R-free | 0.13930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1oek |
RMSD bond length | 0.006 |
RMSD bond angle | 0.941 |
Data reduction software | Aimless |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.730 | 1.050 |
High resolution limit [Å] | 1.010 | 1.010 |
Rmerge | 0.090 | 0.830 |
Number of reflections | 102911 | 5060 |
<I/σ(I)> | 12.4 | |
Completeness [%] | 100.0 | |
Redundancy | 8 | |
CC(1/2) | 0.990 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 293 | 0.1 M sodium acetate, pH 4.5 30 % (w/v) PEG MME 5000 |