7JIK
Human recombinant Beta-2-Glycoprotein 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 159.645, 172.976, 113.439 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.930 - 2.690 |
R-factor | 0.2218 |
Rwork | 0.221 |
R-free | 0.23830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1qub |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.790 |
High resolution limit [Å] | 2.690 | 5.790 | 2.690 |
Rmerge | 0.216 | 0.092 | 3.108 |
Rmeas | 0.231 | 0.099 | 3.301 |
Rpim | 0.080 | 0.035 | 1.102 |
Total number of observations | 365257 | ||
Number of reflections | 43781 | 4577 | 4300 |
<I/σ(I)> | 7 | ||
Completeness [%] | 99.7 | 99.5 | 100 |
Redundancy | 8.3 | 8 | 8.8 |
CC(1/2) | 0.993 | 0.281 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 100mM Hepes, pH 7.5, 1.8M Ammonium Sulfate |