7JI2
Crystal Structure of H2-Kb in complex with a OVA mutant peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-19 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.427, 90.011, 89.674 |
Unit cell angles | 90.00, 111.70, 90.00 |
Refinement procedure
Resolution | 45.010 - 1.950 |
R-factor | 0.1913 |
Rwork | 0.170 |
R-free | 0.18460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kpu |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.980 |
High resolution limit [Å] | 1.950 | 5.290 | 1.950 |
Rmerge | 0.097 | 0.062 | 0.642 |
Rmeas | 0.105 | 0.067 | 0.692 |
Rpim | 0.040 | 0.026 | 0.257 |
Total number of observations | 488045 | ||
Number of reflections | 70409 | 3535 | 3479 |
<I/σ(I)> | 4.8 | ||
Completeness [%] | 98.1 | 96.2 | 98.4 |
Redundancy | 6.9 | 6.8 | 7 |
CC(1/2) | 0.996 | 0.883 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289.15 | 0.200 M Potassium Sodium Tartrate 20.000% (w/v) PEG 3350 |