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7JFZ

Structure of Urocanate hydratase from Legionella pneumophila bound to NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-02-20
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameC 2 2 21
Unit cell lengths73.190, 125.120, 142.160
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.910 - 1.700
R-factor0.1557
Rwork0.155
R-free0.17790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)internal apo structure
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.91037.9101.740
High resolution limit [Å]1.7007.6001.700
Rmerge0.0420.0240.593
Rmeas0.0430.0250.632
Total number of observations1297200
Number of reflections718849015268
<I/σ(I)>39.25113.823.24
Completeness [%]99.998.799.9
Redundancy18.04625.3538.527
CC(1/2)1.0000.9990.912
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP290JCSG+ screen: 15% PEG 3350, 100mM succinic acid / NaOH pH 7.0. LepnA.19522.a.B1.PW38395 at 25.57mg/ml, 1 hr. soak with 5mM histidine; cryo: 25% ethylene glycol; tray 297183; puck bbh6-11

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PDB entries from 2024-11-06

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