7JFZ
Structure of Urocanate hydratase from Legionella pneumophila bound to NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-02-20 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 73.190, 125.120, 142.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.910 - 1.700 |
R-factor | 0.1557 |
Rwork | 0.155 |
R-free | 0.17790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal apo structure |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.910 | 37.910 | 1.740 |
High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
Rmerge | 0.042 | 0.024 | 0.593 |
Rmeas | 0.043 | 0.025 | 0.632 |
Total number of observations | 1297200 | ||
Number of reflections | 71884 | 901 | 5268 |
<I/σ(I)> | 39.25 | 113.82 | 3.24 |
Completeness [%] | 99.9 | 98.7 | 99.9 |
Redundancy | 18.046 | 25.353 | 8.527 |
CC(1/2) | 1.000 | 0.999 | 0.912 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290 | JCSG+ screen: 15% PEG 3350, 100mM succinic acid / NaOH pH 7.0. LepnA.19522.a.B1.PW38395 at 25.57mg/ml, 1 hr. soak with 5mM histidine; cryo: 25% ethylene glycol; tray 297183; puck bbh6-11 |