7JFQ
The crystal structure of 3CL MainPro of SARS-CoV-2 with de-oxidized C145
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-18 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 44.376, 63.461, 107.247 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.000 - 1.550 |
R-factor | 0.1706 |
Rwork | 0.169 |
R-free | 0.19810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6xkh |
RMSD bond length | 0.009 |
RMSD bond angle | 1.016 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.000 | 1.580 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.099 | 0.980 |
Rmeas | 0.110 | 1.109 |
Rpim | 0.047 | 0.508 |
Number of reflections | 44313 | 2189 |
<I/σ(I)> | 21.8 | 2.1 |
Completeness [%] | 99.2 | 98.7 |
Redundancy | 5.2 | 4.4 |
CC(1/2) | 0.993 | 0.589 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 296 | 0.1 M TRIS pH 8.5 and 15% (w/v) PEG 6000 |