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7JFP

GTP-specific succinyl-CoA synthetase complexed with Mg-GDP, phosphohistidine loop pointing towards nucleotide binding site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-01
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.00000
Spacegroup nameP 32 2 1
Unit cell lengths99.645, 99.645, 134.262
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution52.990 - 2.550
R-factor0.2423
Rwork0.240
R-free0.29300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fp4
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (dev_3885)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]52.9902.590
High resolution limit [Å]2.5502.550
Rmerge0.084
Rpim0.063
Number of reflections256601278
<I/σ(I)>8.10.2
Completeness [%]99.8
Redundancy4.6
CC(1/2)0.9990.297
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2941.0 M sodium citrate, Tris-HCl pH 7.4

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PDB entries from 2024-11-06

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