7IA1
Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0029758-001
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-07-31 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92134 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 42.753, 42.753, 217.159 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.290 - 2.533 |
R-factor | 0.2221 |
Rwork | 0.218 |
R-free | 0.30340 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5gpi |
RMSD bond length | 0.007 |
RMSD bond angle | 0.890 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.15) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (23-JAN-2024)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 217.160 | 217.160 | 2.690 |
High resolution limit [Å] | 2.530 | 7.600 | 2.530 |
Rmerge | 0.387 | 0.093 | 5.604 |
Rmeas | 0.395 | 0.096 | 5.714 |
Rpim | 0.079 | 0.023 | 1.104 |
Total number of observations | 182757 | 6209 | 29827 |
Number of reflections | 7448 | ||
<I/σ(I)> | 7.4 | 21.3 | 0.7 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 24.5 | 17.1 | 26.2 |
CC(1/2) | 0.997 | 0.995 | 0.533 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 298 | 30% w/v PEG 2000, 0.2M Ammonium sulfate, 0.1M acetate (pH 4.8) |